A maximum likelihood-based method for detecting conflicting phylogenetic signal in nucleotide sequence alignments
Archibald, J.M. and A.J. Roger (2002) Gene duplication and gene conversion shape the evolution of archaeal chaperonins. J. Mol. Biol. 316:1041-1050.
Archibald, J.M. and A.J. Roger (2002) Gene conversion and the evolution of euryarchaeal chaperonins: a maximum likelihood-based method for detecting conflicting phylogenetic signal. J. Mol. Evol. 55:232-245.
Get the Users Manual here: HTML format or PDF format
To get the latest version of the program you can download the 'tar' file here: Likewind1.0.1.tar .
Once you have down loaded this simply extract the tar file to access the 3 programs:
Hints on extracting the file in a unix environment. At the prompt type:
$ tar xvomf likewind_1.0.tar
Then the folder should be extracted in the current directory.
If you have any questions, do not hesitate to contact the creators John M. Archibald or Andrew J. Roger